CDS

Accession Number TCMCG010C34820
gbkey CDS
Protein Id XP_016546038.1
Location join(<734159..734254,734338..734622,734723..734878,735479..735661,739024..739076,739185..739242,739445..739761,739840..739906,740123..740218,740307..740375,740448..740525,740970..741056,741237..741271,741419..741524,742275..742355,742458..742548,742648..742702,742801..742942,743027..743125,746345..746392,746473..746625,747378..747431,747527..747582,748145..>748235,<759586..759597,759700..759754,790501..790752)
Gene LOC107846076
GeneID 107846076
Organism Capsicum annuum

Protein

Length 980aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016690552.1
Definition PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein 40A-like, partial [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category A
Description Contains two conserved F residues
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12821        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070064        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
CATCTGTTCTTCCTTGCATGGATATTGGTTGAGAAGCCTCCTATACCTTCTCTGGCTGGTCCTGCTCCTGGTGCTATTCCATCTATGTCACTGCAGCAGTTCCAGCCTATGCTTCCAGCCCAGCAGGCACAACCCTATGGTTCCGGGTCGTCTCAAAAATTTCTGCCACTTGGACAGGCAAATGTTGAGATGTTTCAACCTTCTCAAATCCAATTTCCTCAACCTATGCAACAGGTTACTACTGGTAGACCTGTAGTAGGAATGCATAGTATGCCTCAGGGACCACCTATTCCCCATGATTTTCAGCGAAATCTTCCGATGTCAAATAACCACATGCCTGGTTCTAGTGGCCCAAATTTACCTCTTTCTTCTTCATATAATGTAAATGCAGATTCTTCTGGCGGGTATCAGACACAGATAAATAATCATAGGTTTCCATCAGGGGTACAACCCTGTATTCCAATAAGTAATCATAATGTGAATTCTGCAACAACTATGCAGAAGACTGGAGAATTAGCAGCTCCCTTGGTTATTCCGCATCTTTTGATGATTAGTAGGCCAATTATGGTTGCTAATGTTGTCATATTTCCAATGGCTTTATTACTCCAAACAATTAATAACATTCTTACAATTCTTGAATTGATTTTTAGATACTATTATAATAGAAGGACAAGAATCTCTACCTGGGAGAAACCTCAAGAGCTGATGACAGAAATGGAGAAGGAAGATGCATCAACTGACTGGAGAGAATTTACAAGTCCTGAGGGAAGAAAGTATTACTACAACAAGGTTACTAGAACGTCCAAATGGAGAATGCCCGATGAAGTCAAGTTGGCTCATGAAAAGGACACTATTTCGCACGCTTCTGATTTTGGATCCATTTCTGTTGTTAAAACATCATCCCCGGGTACAGATGGTTCATTAGTCTCGGCACACGGTGCTAAATCAAGCCCAATTGTTGTGTCACCAGCTGCTAACTTACCAACTATTATGGCTTCAGAATCATCAAGTTTATCTGGTAAGGTTTCTTCTCCGATGATTGAAACAGTTGAAATAAAGAATTCTTCAGAACCTGCTTCGCCAGTTGTTGCTAATTCGGAGAAAATTGGAATAGCAGTAACCTTTGGAAATTCTATCGCGCCACCGGTTTCTGAGACTACTACAACTCAAGACGCAGTAGTGTATGGTGATGGATTTTCTTTGGAGAATAGAGAGAATATCAAGAAAGATGCTGTAATAACTGAAATCGGAGGTGCTACTCCATCAGATGAGAAAACAGTCAAGCGGGGACCATTAGTTTATGATAGAAAAGAGGAAAAGAGTGCATTCAAAACTCCTTTGGAATCTGCAAATATTGGGTCCAATTGCATATGGGATCAGGCCATGAGAGCAGTAATTAATGACCGGAGATATGGTGCTCTAAAATTCCTTTGTAAGCGGAAGCAACCTTTTAATGAGTATCTTAGCCAAAAGAAAAAACTGGAAGCTGAAGAGAGGCGTGTTAAACAGAAAAAAGCTAGGGAAAATTTCAGGATAATGTTAGAAGATTGCAAGGAGCTGTCACCTTCGTCAAGATGGAGTAAGGCAATCTCCATATTCGAACATGATGAACGTTTTAAAGCTGTTGAGCGAGCTAAAGACTGTGAGGACCTTTGTGAAGATTATGTAGAGGAACTTGAGAAAAAGGAGCATACGAAGGCATTGGAGGAGCAGAAGTGCAATAGAGTGGAGTACTTAGAATTTTTAAAATCCTATGAATTTATTAAGGCCAGTAGCCAGTGGCGGAAAGTTCAAGACCGCTTGGAAACTGATGAAAGATGCTCCCGCCTTGAGAAAATCGATCACTTGGAGATTTTCCAAGAATATATACATAATTTAGAGAGCGAAGAGGAGGAGCAAAGGAAACTGCGGATAGAAGAATTGAGGAAAGCTGAACGTAAAAATCGTGATGAGTTCCGAAAATTAATGGTAGAGCATGTTGTTGCAGGATTACTTAATGCAAAAACTAACTGGCGTGATTATTGCATCAAATTTAGTTTTTCTTTCTTGTGTTCAATTAAAGATTTTGCTACATATCTAGCTGTCTCATCAAATACTTCAGAATCAACAGCAAAATACTTATTTACAGATATTATGGATGGGCTGGAGAAATAGTATCTTGATGACAAGTCACAAATTAAAGATTCAGTTAGGATGGCCGAGATTGGATTGACATCAGCCTGGACGCTTGATGATTTTAAGGTTGCAATCACCAAGTATATTAGCTCTCCACCAATGTCAGATACCAACTTAAAGGTCTAATTATGGCTAAGCACTGTATACTGTTTCACATCGACCCATGCTGAATTGAATGTTCATTTTATCAAACATCTAGCAGATGAGTTCTATGAACTTCTTCATGCATCAAAGGAAATTACTGCATCATCAAAATGGGAGGACTGCAAATCCCTCTTGGAGATAGGCAAAATAATGGGTGATGAGGGCTTGCTGTTTGAAATATTTAACAAATTTGTTAATGAACTAAAAGAGAAGGAGCGCAAGCGTCAAGAGGATAAGTGATTCAAGCCGAGACCTTAGCGTTCCAGTGTTGATTCAGACTATTAGAAGATTGACAAAGGAGAAGGTGCTAAAAAAGGACGAAAATATCAACCAACTTACTAATGATTTGCAAGAATGCATGAAGGAACTTGGAGTTGTGAAGGCGATACTACCAAAAGTGTTTCAGGAGAGGGATTTTATGTGGGAGGAAGTTAAGAGCTACAGTGAGATGAACATGCTGTTGAATTATGAGATCAACATGTTGAAAAGAAAGGTAGATACCCTCGACGAAGACTTTCTTATGAAAGAGGGTCAAATCACAATCTTAAAAGACTAG
Protein:  
HLFFLAWILVEKPPIPSLAGPAPGAIPSMSLQQFQPMLPAQQAQPYGSGSSQKFLPLGQANVEMFQPSQIQFPQPMQQVTTGRPVVGMHSMPQGPPIPHDFQRNLPMSNNHMPGSSGPNLPLSSSYNVNADSSGGYQTQINNHRFPSGVQPCIPISNHNVNSATTMQKTGELAAPLVIPHLLMISRPIMVANVVIFPMALLLQTINNILTILELIFRYYYNRRTRISTWEKPQELMTEMEKEDASTDWREFTSPEGRKYYYNKVTRTSKWRMPDEVKLAHEKDTISHASDFGSISVVKTSSPGTDGSLVSAHGAKSSPIVVSPAANLPTIMASESSSLSGKVSSPMIETVEIKNSSEPASPVVANSEKIGIAVTFGNSIAPPVSETTTTQDAVVYGDGFSLENRENIKKDAVITEIGGATPSDEKTVKRGPLVYDRKEEKSAFKTPLESANIGSNCIWDQAMRAVINDRRYGALKFLCKRKQPFNEYLSQKKKLEAEERRVKQKKARENFRIMLEDCKELSPSSRWSKAISIFEHDERFKAVERAKDCEDLCEDYVEELEKKEHTKALEEQKCNRVEYLEFLKSYEFIKASSQWRKVQDRLETDERCSRLEKIDHLEIFQEYIHNLESEEEEQRKLRIEELRKAERKNRDEFRKLMVEHVVAGLLNAKTNWRDYCIKFSFSFLCSIKDFATYLAVSSNTSESTAKYLFTDIMDGLEKXYLDDKSQIKDSVRMAEIGLTSAWTLDDFKVAITKYISSPPMSDTNLKVXLWLSTVYCFTSTHAELNVHFIKHLADEFYELLHASKEITASSKWEDCKSLLEIGKIMGDEGLLFEIFNKFVNELKEKERKRQEDKNFTDLSKSPHSHSKKVRPKKSGRDSSRDLSVPVLIQTIRRLTKEKVLKKDENINQLTNDLQECMKELGVVKAILPKVFQERDFMWEEVKSYSEMNMLLNYEINMLKRKVDTLDEDFLMKEGQITILKD